STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpa4Carboxypeptidase A4. (417 aa)    
Predicted Functional Partners:
zbtb8b
Zinc finger and BTB domain-containing 8B.
      
 0.873
ela3l
Elastase 3-like; Belongs to the peptidase S1 family.
   
 
 0.785
rpz4
Rapunzel 4.
      
 0.745
cel.1
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
   
  
 0.726
SAT2
Si:dkey-19b23.15.
      
 0.719
ela2l
Elastase 2-like; Belongs to the peptidase S1 family.
   
 
 0.708
faua
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
 
 0.677
sat2a
Spermidine/spermine N1-acetyltransferase family member 2a.
   
  
 0.672
ela2
Elastase 2; Belongs to the peptidase S1 family.
   
 
 0.669
grb10b
Growth factor receptor-bound protein 10b.
      
 0.642
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.