Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC100332609 | rrp15 | ENSDARP00000148590 | ENSDARP00000013273 | Uncharacterized protein. | RRP15-like protein; Belongs to the RRP15 family. | 0.499 |
LOC100332609 | srek1ip1 | ENSDARP00000148590 | ENSDARP00000064211 | Uncharacterized protein. | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | 0.404 |
creg2 | srek1ip1 | ENSDARP00000116391 | ENSDARP00000064211 | Cellular repressor of E1A-stimulated genes 2; Belongs to the CREG family. | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | 0.529 |
dis3l2 | smim15 | ENSDARP00000114941 | ENSDARP00000116430 | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. | Small integral membrane protein 15. | 0.410 |
dis3l2 | srek1ip1 | ENSDARP00000114941 | ENSDARP00000064211 | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | 0.412 |
rrp15 | LOC100332609 | ENSDARP00000013273 | ENSDARP00000148590 | RRP15-like protein; Belongs to the RRP15 family. | Uncharacterized protein. | 0.499 |
rrp15 | srek1ip1 | ENSDARP00000013273 | ENSDARP00000064211 | RRP15-like protein; Belongs to the RRP15 family. | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | 0.458 |
sh3tc2 | srek1ip1 | ENSDARP00000132107 | ENSDARP00000064211 | SH3 domain and tetratricopeptide repeats 2. | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | 0.416 |
smim15 | dis3l2 | ENSDARP00000116430 | ENSDARP00000114941 | Small integral membrane protein 15. | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. | 0.410 |
smim15 | srek1ip1 | ENSDARP00000116430 | ENSDARP00000064211 | Small integral membrane protein 15. | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | 0.579 |
srek1ip1 | LOC100332609 | ENSDARP00000064211 | ENSDARP00000148590 | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | Uncharacterized protein. | 0.404 |
srek1ip1 | creg2 | ENSDARP00000064211 | ENSDARP00000116391 | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | Cellular repressor of E1A-stimulated genes 2; Belongs to the CREG family. | 0.529 |
srek1ip1 | dis3l2 | ENSDARP00000064211 | ENSDARP00000114941 | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily. | 0.412 |
srek1ip1 | rrp15 | ENSDARP00000064211 | ENSDARP00000013273 | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | RRP15-like protein; Belongs to the RRP15 family. | 0.458 |
srek1ip1 | sh3tc2 | ENSDARP00000064211 | ENSDARP00000132107 | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | SH3 domain and tetratricopeptide repeats 2. | 0.416 |
srek1ip1 | smim15 | ENSDARP00000064211 | ENSDARP00000116430 | Protein SREK1IP1; Possible splicing regulator involved in the control of cellular survival. | Small integral membrane protein 15. | 0.579 |