STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmem86aTransmembrane protein 86A. (237 aa)    
Predicted Functional Partners:
dlst
Dihydrolipoamide S-succinyltransferase.
      
 0.834
zdhhc18a
Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family.
      
 0.830
ppp1r14bb
Protein phosphatase 1, regulatory (inhibitor) subunit 14Bb.
      
 0.772
vac14
Protein VAC14 homolog; The PI(3,5)P2 regulatory complex regulates both the synthesis and turnover of phosphatidylinositol 3,5-bisphosphate (PtdIns(3,5)P2). Acts as a positive activator of PIKfyve kinase activity (By similarity).
      
 0.757
map2k5
Mitogen-activated protein kinase kinase 5; Belongs to the protein kinase superfamily.
      
 0.717
crlf2
Fibronectin type-III domain-containing protein.
      
 0.692
GALNTL6
Polypeptide N-acetylgalactosaminyltransferase.
      
 0.669
ktn1
Kinectin 1.
      
 0.665
rras2
Related RAS viral (R-ras) oncogene homolog 2.
   
  
 0.649
isoc2
Isochorismatase domain-containing protein 2; Belongs to the isochorismatase family.
      
 0.645
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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