STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ttc17Tetratricopeptide repeat protein 17; Plays a role in primary ciliogenesis by modulating actin polymerization. (1198 aa)    
Predicted Functional Partners:
ubfd1
Ubiquitin family domain-containing 1.
      
 0.871
fut7
Fucosyltransferase 7 (alpha (1,3) fucosyltransferase).
      
 0.731
kif3b
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
      
 0.692
EFEMP1
EGF containing fibulin extracellular matrix protein 1.
      
 0.648
add3a
Adducin 3 (gamma) a.
      
 0.645
pcnt
Pericentrin.
   
  
 0.617
spef2
Sperm flagellar 2.
      
 0.609
vsig10
V-set and immunoglobulin domain-containing protein 10.
      
 0.569
dstyk
Dual serine/threonine and tyrosine protein kinase; May act as a positive regulator of ERK phosphorylation downstream of fibroblast growth factor-receptor activation. May induce both caspase-dependent apoptosis and caspase-independent cell death (By similarity). Plays a role in the embryonic development.
      
 0.499
lyplal1
Lysophospholipase-like 1.
      
 0.471
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (10%) [HD]