STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
id4Inhibitor of DNA-binding 4. (126 aa)    
Predicted Functional Partners:
olig1
Oligodendrocyte transcription factor 1.
    
 
 0.935
olig2
Oligodendrocyte lineage transcription factor 2.
   
 
 0.922
her15.1
Hairy and enhancer of split-related 15, tandem duplicate 1.
   
  
 0.680
tcf12
Transcription factor 12.
   
 
 0.657
tcf7l2
Transcription factor 7-like 2 (T-cell specific, HMG-box).
   
  
 0.610
tcf3a
Transcription factor 3a.
    
 
 0.584
tcf3b
Transcription factor 3b.
    
 
 0.549
ENSDARP00000150042
Uncharacterized protein.
    
 
 0.549
TCF4
Transcription factor 4.
    
 
 0.549
nkx2.2a
Homeobox protein Nkx-2.2a; Transcriptional activator involved in the development of insulin-producting beta cells in the endocrine pancreas (By similarity). May also be involved in specifying diencephalic neuromeric boundaries, and in controlling the expression of genes that play a role in axonal guidance. Binds to elements within the NEUROD1 promoter (By similarity).
   
 
 0.538
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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