STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
krtt1c19eKeratin type 1 c19e; Belongs to the intermediate filament family. (473 aa)    
Predicted Functional Partners:
zgc:158846
Zgc:158846; Belongs to the intermediate filament family.
  
0.733
zgc:136930
Zgc:136930; Belongs to the intermediate filament family.
   
0.657
F1RDG4_DANRE
Si:dkey-222f2.1; Belongs to the intermediate filament family.
  
0.648
F1Q4X3_DANRE
Si:dkey-222n6.2; Belongs to the intermediate filament family.
  
 
0.643
krt8
Keratin, type II cytoskeletal 8; Together with KRT19, helps to link the contractile apparatus to dystrophin at the costameres of striated muscle.
  
0.624
krt5
Keratin 5; Belongs to the intermediate filament family.
  
0.616
cbln11
Cerebellin 11.
    
 
 0.608
tmem176l.4
Transmembrane protein 176l.4.
   
 
 0.603
X1WG46_DANRE
Si:dkey-239b22.1.
   
 
 0.595
ENSDARP00000131071
Si:dkey-247k7.2.
   
  
 0.586
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.