STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adm2aAdrenomedullin 2a. (154 aa)    
Predicted Functional Partners:
RAMP3
Receptor activity modifying protein 3.
    
 
 0.918
aspdh
Putative L-aspartate dehydrogenase; Specifically catalyzes the NAD or NADP-dependent dehydrogenation of L-aspartate to iminoaspartate.
      
 0.833
cyp2p9
Cytochrome P450, family 2, subfamily P, polypeptide 9; Belongs to the cytochrome P450 family.
      
 0.743
zc3h6
Zinc finger CCCH-type-containing 6.
      
 0.743
ccny
Cyclin Y; Belongs to the cyclin family.
   
  
 0.671
calcr
Calcitonin receptor; Belongs to the G-protein coupled receptor 2 family.
   
 
 0.666
calcrla
Calcitonin gene-related peptide type 1 receptor; Receptor for calcitonin-gene-related peptide (CGRP) (By similarity). Receptor specificity may be modulated by accessory proteins. The activity of this receptor is mediated by G proteins which activate adenylyl cyclase (By similarity); Belongs to the G-protein coupled receptor 2 family.
    
 
 0.664
calcrlb
Calcitonin receptor-like b; Belongs to the G-protein coupled receptor 2 family.
    
 
 0.664
nkl.1
NK-lysin tandem duplicate 2.
      
 0.648
il13ra1
Interleukin 13 receptor, alpha 1.
      
 0.647
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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