STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rradRas-related-associated with diabetes. (300 aa)    
Predicted Functional Partners:
arhgef3l
Rho guanine nucleotide exchange factor (GEF) 3,-like.
    
 
 0.872
arhgef18b
Rho/rac guanine nucleotide exchange factor (GEF) 18b.
    
 
 0.776
rapgefl1
Rap guanine nucleotide exchange factor (GEF)-like 1.
    
 
 0.695
snn
Stannin.
   
  
 0.670
phactr2
Phosphatase and actin regulator.
      
 0.637
itsn2a
Intersectin 2a.
    
 
 0.581
itsn2b
Intersectin 2b.
    
 
 0.581
rasal3
RAS protein activator-like 3.
    
 
 0.574
itsn1
Intersectin 1 (SH3 domain protein).
    
 
 0.551
dcp1b
Decapping mRNA 1B.
      
 0.545
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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