STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F1QYP6_DANRECarboxypeptidase; Belongs to the peptidase S10 family. (457 aa)    
Predicted Functional Partners:
acp2
Acid phosphatase 2, lysosomal; Belongs to the histidine acid phosphatase family.
   
  
 0.770
glb1
Beta-galactosidase.
   
 
 0.722
glb1l
Galactosidase, beta 1-like; Belongs to the glycosyl hydrolase 35 family.
   
 
 0.712
neu1
Novel protein similar to vertebrate sialidase 1 (Lysosomal sialidase) (NEU1).
   
 
 0.621
ctsc
Cathepsin C; Belongs to the peptidase C1 family.
   
 
 0.617
pebp1
Phosphatidylethanolamine-binding protein 1.
   
 
 0.592
pebp4
Phosphatidylethanolamine binding protein 4.
   
 
 0.592
erlec1
Endoplasmic reticulum lectin 1.
   
 
 0.567
os9
OS9 endoplasmic reticulum lectin.
   
 
 0.567
sort1a
Sortilin; Functions as a sorting receptor in the Golgi compartment and as a clearance receptor on the cell surface. Belongs to the VPS10-related sortilin family. SORT1 subfamily.
   
  
 0.556
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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