STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
blcapBladder cancer-associated protein. (87 aa)    
Predicted Functional Partners:
azin1b
Antizyme inhibitor 1b; Belongs to the Orn/Lys/Arg decarboxylase class-II family.
   
  
 0.818
ubxn11
UBX domain protein 11.
      
 0.743
ints1
Integrator complex subunit 1.
   
  
 0.725
cog3
Component of oligomeric golgi complex 3.
      
 0.700
cyfip2
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
      
 0.694
UTP14C
Si:dkey-251i10.3.
   
  
 0.616
adar
Adenosine deaminase RNA-specific.
   
  
 0.606
rbbp9
Retinoblastoma-binding protein 9.
   
  
 0.594
ipcef1
Interaction protein for cytohesin exchange factors 1.
      
 0.560
rorcb
RAR-related orphan receptor C b.
      
 0.540
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.