STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6P152_DANRESi:ch211-236k19.2. (255 aa)    
Predicted Functional Partners:
rab14l
RAB14, member RAS oncogene family,-like.
    
 
 0.881
ttll11
Tubulin tyrosine ligase-like family, member 11.
      
 0.849
dab2ipa
DAB2-interacting protein a.
   
  
 0.833
fbxw2
F-box and WD repeat domain-containing 2.
      
 0.825
rasal3
RAS protein activator-like 3.
   
  
 0.809
psmd5
Proteasome 26S subunit, non-ATPase 5.
      
 0.764
rab14
RAB14, member RAS oncogene family.
    
 
 0.747
dab2ipb
DAB2-interacting protein b.
   
  
 0.695
fkbpl
FKBP prolyl isomerase-like.
   
  
 0.563
dchs1a
Dachsous cadherin-related 1a.
      
 0.561
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.