STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ubqln4Ubiquilin 4. (599 aa)    
Predicted Functional Partners:
psmd14
Proteasome 26S subunit, non-ATPase 14.
   
 
 0.948
psmd13
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 13.
   
 
 0.930
psmc2
Proteasome (Prosome, macropain) 26S subunit, ATPase 2; Belongs to the AAA ATPase family.
   
 
 0.920
psmd8
Proteasome 26S subunit, non-ATPase 8.
   
 
 0.916
adrm1
Proteasomal ubiquitin receptor ADRM1; Functions as a proteasomal ubiquitin receptor. Promotes the deubiquitinating activity associated with the 26S proteasome (By similarity); Belongs to the ADRM1 family.
   
 
 0.916
uba52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
   
 
 0.914
psmc3
Proteasome 26S subunit, ATPase 3; Belongs to the AAA ATPase family.
   
 
 0.905
ube4b
Ubiquitination factor E4B, UFD2 homolog (S. cerevisiae).
   
 
 0.903
psmc5
Proteasome (Prosome, macropain) 26S subunit, ATPase, 5; Belongs to the AAA ATPase family.
   
 
 0.902
psmd12
Proteasome (Prosome, macropain) 26S subunit, non-ATPase, 12.
   
 
 0.899
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.