STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cog4Conserved oligomeric Golgi complex subunit 4; Required for normal Golgi function. Plays a role in the vesicular trafficking between the endoplasmic reticulum and the Golgi apparatus (By similarity); Belongs to the COG4 family. (781 aa)    
Predicted Functional Partners:
cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.998
cog2
Component of oligomeric golgi complex 2.
   
 0.998
cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.998
cog3
Component of oligomeric golgi complex 3.
   
 0.998
cog1
Component of oligomeric golgi complex 1.
    
 0.998
cog7
Component of oligomeric golgi complex 7.
    
 0.997
cog5
Component of oligomeric golgi complex 5.
    
 0.997
scfd1
Sec1 family domain-containing 1; Belongs to the STXBP/unc-18/SEC1 family.
   
 
 0.964
stx16
Syntaxin 16; Belongs to the syntaxin family.
     
 0.953
ykt6
Synaptobrevin homolog YKT6; Vesicular soluble NSF attachment protein receptor (v-SNARE) mediating vesicle docking and fusion to a specific acceptor cellular compartment. Functions in endoplasmic reticulum to Golgi transport; as part of a SNARE complex composed of GOSR1, GOSR2 and STX5. Functions in early/recycling endosome to TGN transport; as part of a SNARE complex composed of BET1L, GOSR1 and STX5. Has a S-palmitoyl transferase activity.
     
 0.915
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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