STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rhofRas homolog gene family, member F. (209 aa)    
Predicted Functional Partners:
diaph2
Diaphanous-related formin 2.
   
 0.809
tmem120b
Transmembrane protein 120B; May play a role in adipogenesis. Belongs to the TMEM120 family.
      
 0.800
itsn2a
Intersectin 2a.
    
 
 0.791
itsn2b
Intersectin 2b.
    
 
 0.791
whamm
Uncharacterized protein.
    
 0.776
itsn1
Intersectin 1 (SH3 domain protein).
    
 
 0.761
arhgap1
Rho GTPase-activating protein 1.
    
 0.693
pak6b
Non-specific serine/threonine protein kinase.
   
 0.693
diaph3
Diaphanous-related formin 3.
   
 0.682
morn3
MORN repeat-containing 3.
      
 0.670
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.