STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
imp4IMP4, U3 small nucleolar ribonucleoprotein, homolog (Yeast). (291 aa)    
Predicted Functional Partners:
wdr36
WD repeat domain 36.
   
 0.999
mphosph10
U3 small nucleolar ribonucleoprotein protein MPP10; Component of the 60-80S U3 small nucleolar ribonucleoprotein (U3 snoRNP). Required for the early cleavages during pre-18S ribosomal RNA processing; Belongs to the MPP10 family.
   
 0.999
noc4l
Nucleolar complex protein 4 homolog.
   
 0.999
pwp2h
PWP2 small subunit processome component.
   
 0.999
rrp9
Ribosomal RNA-processing 9, U3 small nucleolar RNA-binding protein.
   
 0.999
imp3
IMP U3 small nucleolar ribonucleoprotein 3.
   
 0.999
bysl
Bystin-like.
   
 
 0.998
utp4
Cirrhosis, autosomal recessive 1A (Cirhin).
   
  0.998
bms1
BMS1 ribosome biogenesis factor.
   
 0.998
tbl3
Transducin beta-like 3.
   
 0.998
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.