Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
dio2 | nkx2.1 | ENSDARP00000120358 | ENSDARP00000025546 | Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine). | NK2 homeobox 1b. | 0.644 |
dio2 | nkx2.4b | ENSDARP00000120358 | ENSDARP00000138951 | Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine). | NK2 homeobox 1a. | 0.567 |
dio2 | pax8 | ENSDARP00000120358 | ENSDARP00000033414 | Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine). | Paired box 8. | 0.802 |
dio2 | slc5a5 | ENSDARP00000120358 | ENSDARP00000130752 | Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine). | Solute carrier family 5 member 5; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.743 |
dio2 | tg | ENSDARP00000120358 | ENSDARP00000018938 | Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine). | Thyroglobulin. | 0.862 |
dio2 | tshr | ENSDARP00000120358 | ENSDARP00000054085 | Iodothyronine deiodinase; Responsible for the deiodination of T4 (3,5,3',5'- tetraiodothyronine). | Thyrotropin receptor; Receptor for the thyroid-stimulating hormone (TSH) or thyrotropin. Also acts as a receptor for the heterodimeric glycoprotein hormone (GPHA2:GPHB5) or thyrostimulin. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Plays a central role in controlling thyroid cell metabolism. Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily. | 0.794 |
eya1 | foxi1 | ENSDARP00000117417 | ENSDARP00000133283 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | Forkhead box I1. | 0.757 |
eya1 | lhx1a | ENSDARP00000117417 | ENSDARP00000021069 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | LIM/homeobox protein Lhx1; Seems to play a role in dorsal axis formation. | 0.509 |
eya1 | pax8 | ENSDARP00000117417 | ENSDARP00000033414 | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | Paired box 8. | 0.786 |
foxe1 | nkx2.1 | ENSDARP00000127024 | ENSDARP00000025546 | Forkhead box E1. | NK2 homeobox 1b. | 0.625 |
foxe1 | nkx2.4b | ENSDARP00000127024 | ENSDARP00000138951 | Forkhead box E1. | NK2 homeobox 1a. | 0.644 |
foxe1 | pax8 | ENSDARP00000127024 | ENSDARP00000033414 | Forkhead box E1. | Paired box 8. | 0.864 |
foxe1 | slc5a5 | ENSDARP00000127024 | ENSDARP00000130752 | Forkhead box E1. | Solute carrier family 5 member 5; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. | 0.835 |
foxe1 | tg | ENSDARP00000127024 | ENSDARP00000018938 | Forkhead box E1. | Thyroglobulin. | 0.741 |
foxe1 | tshr | ENSDARP00000127024 | ENSDARP00000054085 | Forkhead box E1. | Thyrotropin receptor; Receptor for the thyroid-stimulating hormone (TSH) or thyrotropin. Also acts as a receptor for the heterodimeric glycoprotein hormone (GPHA2:GPHB5) or thyrostimulin. The activity of this receptor is mediated by G proteins which activate adenylate cyclase. Plays a central role in controlling thyroid cell metabolism. Belongs to the G-protein coupled receptor 1 family. FSH/LSH/TSH subfamily. | 0.837 |
foxi1 | eya1 | ENSDARP00000133283 | ENSDARP00000117417 | Forkhead box I1. | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | 0.757 |
foxi1 | pax8 | ENSDARP00000133283 | ENSDARP00000033414 | Forkhead box I1. | Paired box 8. | 0.820 |
lhx1a | eya1 | ENSDARP00000021069 | ENSDARP00000117417 | LIM/homeobox protein Lhx1; Seems to play a role in dorsal axis formation. | Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family. | 0.509 |
lhx1a | nkx2.4b | ENSDARP00000021069 | ENSDARP00000138951 | LIM/homeobox protein Lhx1; Seems to play a role in dorsal axis formation. | NK2 homeobox 1a. | 0.416 |
lhx1a | pax8 | ENSDARP00000021069 | ENSDARP00000033414 | LIM/homeobox protein Lhx1; Seems to play a role in dorsal axis formation. | Paired box 8. | 0.856 |
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