STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
c1galt1bGlycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1-B; Glycosyltransferase that generates the core 1 O-glycan Gal- beta1-3GalNAc-alpha1-Ser/Thr (T antigen), which is a precursor for many extended O-glycans in glycoproteins; Belongs to the glycosyltransferase 31 family. Beta3-Gal-T subfamily. (374 aa)    
Predicted Functional Partners:
gcnt3
Glucosaminyl (N-acetyl) transferase 3, mucin type.
   
 0.985
st3gal1l3
ST3 beta-galactoside alpha-2,3-sialyltransferase 1,-like 3; Belongs to the glycosyltransferase 29 family.
    
 0.983
st3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
    
 0.936
st6galnac1.2
Si:ch211-51n14.2; Belongs to the glycosyltransferase 29 family.
    
 0.932
st6galnac1.1
Alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase (sialyltransferase 7A); Belongs to the glycosyltransferase 29 family.
    
 0.932
gcnt4a
Beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4; Glycosyltransferase that mediates core 2 O-glycan branching, an important step in mucin-type biosynthesis.
   
 0.931
galnt2
Polypeptide N-acetylgalactosaminyltransferase.
     
 0.929
st3gal8
ST3 beta-galactoside alpha-2,3-sialyltransferase 8; Belongs to the glycosyltransferase 29 family.
   
 0.924
galnt12
Polypeptide N-acetylgalactosaminyltransferase.
   
 
 0.890
Galnt5
Ricin B-type lectin domain-containing protein.
     
 0.866
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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