STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zgc:158423Zgc:158423. (480 aa)    
Predicted Functional Partners:
F1QSV1_DANRE
Si:ch73-352p4.8.
   
 0.966
slc7a11
Solute carrier family 7 member 11.
   
 0.966
slc7a5
Solute carrier family 7 member 5.
   
 0.950
slc3a2b
Solute carrier family 3 member 2b.
  
  
 
0.904
slc3a2a
Solute carrier family 3 member 2a.
  
  
 
0.902
gbe1a
Glucan (1,4-alpha-),-branching enzyme 1a.
  
 
 0.646
gbe1b
Glucan (1,4-alpha-),-branching enzyme 1b.
  
 
 0.646
pudp
Pseudouridine 5'-phosphatase.
  
 
 0.626
aldh18a1
Delta-1-pyrroline-5-carboxylate synthase; In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
  
  
 0.612
pgghg
Protein-glucosylgalactosylhydroxylysine glucosidase; Catalyzes the hydrolysis of glucose from the disaccharide unit linked to hydroxylysine residues of collagen and collagen-like proteins; Belongs to the glycosyl hydrolase 65 family.
  
 
 0.607
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.