STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyb5d1Cytochrome b5 domain-containing protein 1; Belongs to the cytochrome b5 family. (214 aa)    
Predicted Functional Partners:
ogfrl2
Opioid growth factor receptor-like 2.
      
 0.954
itln2
Intelectin 2.
    
 
 0.895
cfap58
Cilia and flagella-associated protein 58.
   
  
 0.751
cyb5r4
Cytochrome b5 reductase 4; NADH-cytochrome b5 reductase involved in endoplasmic reticulum stress response pathway; Belongs to the flavoprotein pyridine nucleotide cytochrome reductase family.
   
 
 0.748
dnali1
Dynein, axonemal, light intermediate chain 1.
  
  
 0.741
iqca1
IQ motif-containing with AAA domain 1.
    
 
 0.740
oxgr1b
Oxoglutarate (alpha-ketoglutarate) receptor 1b.
      
 0.736
tnfsf13b
TNF superfamily member 13b; Belongs to the tumor necrosis factor family.
      
 0.722
suox
Sulfite oxidase.
   
  
 0.719
edar
Ectodysplasin A receptor.
      
 0.675
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.