STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mov10b.2Putative helicase mov-10-B.2; Probable RNA helicase. Required for RNA-mediated gene silencing by the RNA-induced silencing complex (RISC). Required for both miRNA-mediated translational repression and miRNA-mediated cleavage of complementary mRNAs by RISC (By similarity). (1015 aa)    
Predicted Functional Partners:
arl1
ADP-ribosylation factor-like 1; Belongs to the small GTPase superfamily. Arf family.
    
 
 0.699
trim33l
Tripartite motif-containing 33,-like.
    
 
 0.695
adarb1b
Adenosine deaminase RNA-specific B1b.
    
 
 0.685
trim109
Tripartite motif-containing 109.
    
 
 0.674
trim105
Tripartite motif-containing 105.
    
 
 0.674
trim107
Tripartite motif-containing 107.
    
 
 0.674
napab
N-ethylmaleimide sensitive fusion protein attachment protein alpha.
      
 0.669
trim110
Tripartite motif-containing 110.
      
 0.668
trim46b
Tripartite motif-containing 46b.
      
 0.668
ccl35.1
Chemokine (C-C motif) ligand 35, duplicate 1.
   
  
 0.664
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (28%) [HD]