STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mpv17l2Mpv17-like protein 2; Required for the assembly and stability of the mitochondrial ribosome (By similarity). Is a positive regulator of mitochondrial protein synthesis (By similarity). (199 aa)    
Predicted Functional Partners:
pex19
Peroxisomal biogenesis factor 19.
   
 
 0.723
mrpl48
Mitochondrial ribosomal protein L48.
   
  
 0.608
mrpl45
Mitochondrial ribosomal protein L45.
   
  
 0.608
mrps22
Mitochondrial ribosomal protein S22.
   
  
 0.591
mrps18b
Mitochondrial ribosomal protein S18B.
   
  
 0.590
acot13
Acyl-CoA thioesterase 13.
   
  
 0.580
mettl15
Methyltransferase-like 15.
      
 0.573
tmem135
Transmembrane protein 135.
   
  
 0.566
pmp22a
Peripheral myelin protein 22a.
      
 0.565
ddx28
DEAD (Asp-Glu-Ala-Asp) box polypeptide 28.
   
 
 0.560
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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