STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q1LXQ4_DANRENovel protein with a Lectin C-type domain. (263 aa)    
Predicted Functional Partners:
E7F9T6_DANRE
Si:ch211-66e2.5.
   
 0.544
F1R4N6_DANRE
Si:ch73-208g10.1.
    
  0.533
F1RCN3_DANRE
Si:ch211-66e2.3.
   
  0.523
icam3
Intercellular adhesion molecule 3.
   
  0.523
zgc:174904
Zgc:174904.
  
 
 
0.507
syk
Tyrosine-protein kinase.
    
  0.503
si:ch73-1f23.1
Si:ch73-1f23.1.
    
  0.501
LOC566194
Sc:d0202.
     
  0.499
icam3-2
Si:ch211-74m13.1.
     
  0.499
fcer1g
Fc fragment of IgE, high affinity I, receptor for; gamma polypeptide.
   
  0.418
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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