Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
atl1 | reep1 | ENSDARP00000101056 | ENSDARP00000023771 | Atlastin GTPase 1. | Receptor expression-enhancing protein. | 0.976 |
atl1 | reep5 | ENSDARP00000101056 | ENSDARP00000137299 | Atlastin GTPase 1. | Receptor expression-enhancing protein. | 0.542 |
atl1 | reep6 | ENSDARP00000101056 | ENSDARP00000107799 | Atlastin GTPase 1. | Receptor expression-enhancing protein 6; Required correct function and survival of retinal photoreceptors. Required for retinal development (By similarity). In rod photoreceptors, facilitates stability and/or trafficking of guanylate cyclases and is required to maintain endoplasmic reticulum and mitochondrial homeostasis (By similarity). May play a role in clathrin-coated intracellular vesicle trafficking of proteins from the endoplasmic reticulum to the retinal rod plasma membrane (By similarity). | 0.733 |
atl1 | retreg1 | ENSDARP00000101056 | ENSDARP00000099481 | Atlastin GTPase 1. | Reticulophagy regulator 1. | 0.419 |
atl1 | rtn2b | ENSDARP00000101056 | ENSDARP00000073887 | Atlastin GTPase 1. | Reticulon. | 0.828 |
atl2 | reep1 | ENSDARP00000074909 | ENSDARP00000023771 | Atlastin GTPase 2. | Receptor expression-enhancing protein. | 0.894 |
atl2 | reep5 | ENSDARP00000074909 | ENSDARP00000137299 | Atlastin GTPase 2. | Receptor expression-enhancing protein. | 0.569 |
atl2 | reep6 | ENSDARP00000074909 | ENSDARP00000107799 | Atlastin GTPase 2. | Receptor expression-enhancing protein 6; Required correct function and survival of retinal photoreceptors. Required for retinal development (By similarity). In rod photoreceptors, facilitates stability and/or trafficking of guanylate cyclases and is required to maintain endoplasmic reticulum and mitochondrial homeostasis (By similarity). May play a role in clathrin-coated intracellular vesicle trafficking of proteins from the endoplasmic reticulum to the retinal rod plasma membrane (By similarity). | 0.453 |
atl2 | rtn2b | ENSDARP00000074909 | ENSDARP00000073887 | Atlastin GTPase 2. | Reticulon. | 0.767 |
atl2 | sec63 | ENSDARP00000074909 | ENSDARP00000006629 | Atlastin GTPase 2. | SEC63 homolog, protein translocation regulator. | 0.429 |
atl3 | reep1 | ENSDARP00000012931 | ENSDARP00000023771 | Atlastin 3. | Receptor expression-enhancing protein. | 0.889 |
atl3 | reep5 | ENSDARP00000012931 | ENSDARP00000137299 | Atlastin 3. | Receptor expression-enhancing protein. | 0.497 |
atl3 | retreg1 | ENSDARP00000012931 | ENSDARP00000099481 | Atlastin 3. | Reticulophagy regulator 1. | 0.739 |
atl3 | rtn2b | ENSDARP00000012931 | ENSDARP00000073887 | Atlastin 3. | Reticulon. | 0.779 |
nus1 | rtn2b | ENSDARP00000034808 | ENSDARP00000073887 | Dehydrodolichyl diphosphate synthase complex subunit nus1; With DHDDS, forms the dehydrodolichyl diphosphate synthase (DDS) complex, an essential component of the dolichol monophosphate (Dol-P) biosynthetic machinery. Adds multiple copies of isopentenyl pyrophosphate (IPP) to farnesyl pyrophosphate (FPP) to produce dehydrodolichyl diphosphate (Dedol-PP), a precursor of dolichol which is utilized as a sugar carrier in protein glycosylation in the endoplasmic reticulum (ER). Regulates the glycosylation and stability of nascent NPC2, thereby promoting trafficking of LDL-derived cholestero [...] | Reticulon. | 0.729 |
reep1 | atl1 | ENSDARP00000023771 | ENSDARP00000101056 | Receptor expression-enhancing protein. | Atlastin GTPase 1. | 0.976 |
reep1 | atl2 | ENSDARP00000023771 | ENSDARP00000074909 | Receptor expression-enhancing protein. | Atlastin GTPase 2. | 0.894 |
reep1 | atl3 | ENSDARP00000023771 | ENSDARP00000012931 | Receptor expression-enhancing protein. | Atlastin 3. | 0.889 |
reep1 | reep5 | ENSDARP00000023771 | ENSDARP00000137299 | Receptor expression-enhancing protein. | Receptor expression-enhancing protein. | 0.415 |
reep1 | reep6 | ENSDARP00000023771 | ENSDARP00000107799 | Receptor expression-enhancing protein. | Receptor expression-enhancing protein 6; Required correct function and survival of retinal photoreceptors. Required for retinal development (By similarity). In rod photoreceptors, facilitates stability and/or trafficking of guanylate cyclases and is required to maintain endoplasmic reticulum and mitochondrial homeostasis (By similarity). May play a role in clathrin-coated intracellular vesicle trafficking of proteins from the endoplasmic reticulum to the retinal rod plasma membrane (By similarity). | 0.434 |
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