STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
plpp6Phospholipid phosphatase 6; Phosphatase that dephosphorylates presqualene diphosphate (PSDP) into presqualene monophosphate (PSMP). PSDP is a bioactive lipid that rapidly remodels to presqualene monophosphate PSMP upon cell activation (By similarity). (288 aa)    
Predicted Functional Partners:
mylkb
Myosin light chain kinase b.
      
 0.853
LOC100330650
G_PROTEIN_RECEP_F1_2 domain-containing protein.
      
 0.853
calm3b
Calmodulin 3b (phosphorylase kinase, delta).
      
 0.840
calm3a
Calmodulin 3a (phosphorylase kinase, delta).
      
 0.840
calm1a
Calmodulin 1a.
      
 0.837
prrc2c
Proline-rich coiled-coil 2C.
      
 0.831
mettl13
eEF1A lysine and N-terminal methyltransferase; Dual methyltransferase that catalyzes methylation of elongation factor 1-alpha (eef1a1 and eef1a2) at two different positions, and is therefore involved in the regulation of mRNA translation. Via its C-terminus, methylates the N-terminus of eef1a1 and eef1a2. Via its N-terminus dimethylates lysine residues of eef1a1 and eef1a2.
      
 0.823
calm1b
Calmodulin 1b.
      
 0.791
calm2b
Calmodulin; Belongs to the calmodulin family.
      
 0.781
gpr182
G protein-coupled receptor 182; Belongs to the G-protein coupled receptor 1 family.
      
 0.775
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.