STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
si:dkey-27b3.2Si:dkey-27b3.2. (294 aa)    
Predicted Functional Partners:
myo18ab
Myosin XVIIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.906
ENSDARP00000143169
Uncharacterized protein.
    
 
 0.836
pter
Phosphotriesterase-related protein.
    
 
 0.745
MGAT5B
Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B.
   
 
 0.716
E7F1W2_DANRE
Si:ch211-132p1.3.
      
 0.697
zfr
Zinc finger RNA-binding protein; Involved in postimplantation and gastrulation stages of development. Binds to DNA and RNA (By similarity).
   
  
 0.670
btf3l4
Transcription factor BTF3 homolog 4; Belongs to the NAC-beta family.
      
 0.670
eif2b5
Eukaryotic translation initiation factor 2B, subunit 5 epsilon.
    
 
 0.657
cdh10a
Cadherin 10, type 2a (T2-cadherin); Cadherins are calcium-dependent cell adhesion proteins.
    
 
 0.652
pdzd2
PDZ domain-containing 2.
    
 
 0.648
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.