STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc25a26S-adenosylmethionine mitochondrial carrier protein; Mitochondrial solute carriers shuttle metabolites, nucleotides, and cofactors through the mitochondrial inner membrane. Specifically mediates the transport of S-adenosylmethionine (SAM) into the mitochondria (By similarity). (267 aa)    
Predicted Functional Partners:
slc2a9l1
Solute carrier family 2 member 9,-like 1.
      
 0.882
wdr48a
WD repeat domain 48a.
 
      0.879
pphln1
Periphilin 1.
      
 0.874
slc25a3b
Solute carrier family 25 member 3b; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.846
thoc7
THO complex subunit 7 homolog; Required for efficient export of polyadenylated RNA. Acts as component of the THO subcomplex of the TREX complex which is thought to couple mRNA transcription, processing and nuclear export, and which specifically associates with spliced mRNA and not with unspliced pre- mRNA. TREX is recruited to spliced mRNAs by a transcription-independent mechanism, binds to mRNA upstream of the exon-junction complex (EJC) and is recruited in a splicing- and cap-dependent manner to a region near the 5' end of the mRNA where it functions in mRNA export to the cytoplasm v [...]
      
 0.813
nfs1
NFS1 nitrogen fixation 1 (S. cerevisiae).
 
 
  
 0.795
psmd6
Proteasome 26S subunit, non-ATPase 6.
   
  
 0.791
mrpl57
Ribosomal protein 63, mitochondrial.
   
  
 0.724
mrpl1
Mitochondrial ribosomal protein L1.
   
  
 0.698
magi1b
Membrane-associated guanylate kinase, WW and PDZ domain-containing 1b.
      
 0.664
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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