Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
sars2 | scly | ENSDARP00000140088 | ENSDARP00000099679 | Seryl-tRNA synthetase 2, mitochondrial. | Selenocysteine lyase. | 0.537 |
sars2 | sephs1 | ENSDARP00000140088 | ENSDARP00000075586 | Seryl-tRNA synthetase 2, mitochondrial. | Selenide, water dikinase 1; Synthesizes selenophosphate from selenide and ATP. | 0.747 |
sars2 | sephs2 | ENSDARP00000140088 | ENSDARP00000026731 | Seryl-tRNA synthetase 2, mitochondrial. | Selenophosphate synthetase 2. | 0.831 |
sars2 | sepsecs | ENSDARP00000140088 | ENSDARP00000042491 | Seryl-tRNA synthetase 2, mitochondrial. | O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. Belongs to the SepSecS family. | 0.853 |
sars2 | trnau1apb | ENSDARP00000140088 | ENSDARP00000073432 | Seryl-tRNA synthetase 2, mitochondrial. | tRNA selenocysteine 1-associated protein 1-like; Involved in the early steps of selenocysteine biosynthesis and tRNA(Sec) charging to the later steps resulting in the cotranslational incorporation of selenocysteine into selenoproteins. Belongs to the RRM TRSPAP family. | 0.708 |
scly | sars2 | ENSDARP00000099679 | ENSDARP00000140088 | Selenocysteine lyase. | Seryl-tRNA synthetase 2, mitochondrial. | 0.537 |
scly | selenol | ENSDARP00000099679 | ENSDARP00000157551 | Selenocysteine lyase. | Uncharacterized protein. | 0.645 |
scly | selenom | ENSDARP00000099679 | ENSDARP00000119889 | Selenocysteine lyase. | Selenoprotein M; May function as a thiol-disulfide oxidoreductase that participates in disulfide bond formation; Belongs to the selenoprotein M/F family. | 0.761 |
scly | sephs1 | ENSDARP00000099679 | ENSDARP00000075586 | Selenocysteine lyase. | Selenide, water dikinase 1; Synthesizes selenophosphate from selenide and ATP. | 0.991 |
scly | sephs2 | ENSDARP00000099679 | ENSDARP00000026731 | Selenocysteine lyase. | Selenophosphate synthetase 2. | 0.987 |
scly | sepsecs | ENSDARP00000099679 | ENSDARP00000042491 | Selenocysteine lyase. | O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. Belongs to the SepSecS family. | 0.656 |
scly | trnau1apb | ENSDARP00000099679 | ENSDARP00000073432 | Selenocysteine lyase. | tRNA selenocysteine 1-associated protein 1-like; Involved in the early steps of selenocysteine biosynthesis and tRNA(Sec) charging to the later steps resulting in the cotranslational incorporation of selenocysteine into selenoproteins. Belongs to the RRM TRSPAP family. | 0.691 |
scly | txnrd2.2 | ENSDARP00000099679 | ENSDARP00000103469 | Selenocysteine lyase. | Thioredoxin reductase 2, tandem duplicate 2. | 0.916 |
scly | txnrd3 | ENSDARP00000099679 | ENSDARP00000135844 | Selenocysteine lyase. | Thioredoxin reductase 3. | 0.936 |
selenol | scly | ENSDARP00000157551 | ENSDARP00000099679 | Uncharacterized protein. | Selenocysteine lyase. | 0.645 |
selenol | selenom | ENSDARP00000157551 | ENSDARP00000119889 | Uncharacterized protein. | Selenoprotein M; May function as a thiol-disulfide oxidoreductase that participates in disulfide bond formation; Belongs to the selenoprotein M/F family. | 0.811 |
selenol | sephs1 | ENSDARP00000157551 | ENSDARP00000075586 | Uncharacterized protein. | Selenide, water dikinase 1; Synthesizes selenophosphate from selenide and ATP. | 0.711 |
selenol | sephs2 | ENSDARP00000157551 | ENSDARP00000026731 | Uncharacterized protein. | Selenophosphate synthetase 2. | 0.540 |
selenol | sepsecs | ENSDARP00000157551 | ENSDARP00000042491 | Uncharacterized protein. | O-phosphoseryl-tRNA(Sec) selenium transferase; Converts O-phosphoseryl-tRNA(Sec) to selenocysteinyl- tRNA(Sec) required for selenoprotein biosynthesis. Belongs to the SepSecS family. | 0.644 |
selenol | trnau1apb | ENSDARP00000157551 | ENSDARP00000073432 | Uncharacterized protein. | tRNA selenocysteine 1-associated protein 1-like; Involved in the early steps of selenocysteine biosynthesis and tRNA(Sec) charging to the later steps resulting in the cotranslational incorporation of selenocysteine into selenoproteins. Belongs to the RRM TRSPAP family. | 0.833 |
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