STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ankrd33baAnkyrin repeat domain 33ba. (510 aa)    
Predicted Functional Partners:
polr2f
Polymerase (RNA) II (DNA directed) polypeptide F.
  
  
 0.523
zgc:174895
Zgc:174895.
  
 
 0.504
aprt
Adenine phosphoribosyltransferase.
  
 
 0.504
gart
Phosphoribosylglycinamide formyltransferase.
  
 
 0.503
gmps
Guanine monophosphate synthase.
  
 
 0.471
tyms
Thymidylate synthetase.
   
 
 0.465
ak7b
Adenylate kinase 7b.
   
 0.429
patj
PATJ crumbs cell polarity complex component.
   
 
 0.417
rrm1
Ribonucleoside-diphosphate reductase large subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase large chain family.
     
 0.401
ak5
Adenylate kinase 5; Belongs to the adenylate kinase family.
   
 0.400
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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