STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
socs6Suppressor of cytokine-signaling 6a. (519 aa)    
Predicted Functional Partners:
eloca
Elongin C paralog a; Belongs to the SKP1 family.
    
 0.761
elocb
Elongin C paralog b; Belongs to the SKP1 family.
    
 0.761
cul5a
Cullin 5a; Belongs to the cullin family.
   
 0.728
socs5b
Suppressor of cytokine signaling 5-like.
     
0.645
socs9
Suppressor of cytokine-signaling 9.
   
 
0.633
socs5a
Suppressor of cytokine-signaling 5a.
     
0.633
socs2
Suppressor of cytokine signaling 2.
   
 
0.626
ENSDARP00000131928
Si:ch211-156l18.8.
      
 0.617
socs1a
Suppressor of cytokine-signaling 1a.
     
0.615
pik3r3b
Phosphoinositide-3-kinase, regulatory subunit, polypeptide 3 (P55, gamma).
    
0.595
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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