STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
acot22Acyl-CoA thioesterase 22. (438 aa)    
Predicted Functional Partners:
plppr1
Phospholipid phosphatase-related protein type 1.
   
  
 0.977
scp2a
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.579
ehhadh
Enoyl-CoA hydratase/3,2-trans-enoyl-CoA isomerase; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.534
acot7
Acyl-CoA thioesterase 7.
   
 
 0.528
pex5
Peroxisomal biogenesis factor 5.
     
 0.526
acot8
Acyl-CoA thioesterase 8.
   
 
 0.522
UBB
Si:ch211-202a12.4.
   
  0.516
rps27a
Ribosomal protein S27a.
   
  0.516
ubc
Ubiquitin C.
   
  0.516
ubb
Ubiquitin B.
   
  0.516
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.