STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ms4a17a.4Membrane-spanning 4-domains, subfamily A, member 17A.4. (252 aa)    
Predicted Functional Partners:
cbln13
Cerebellin 13.
      
 0.860
slc25a38a
Mitochondrial glycine transporter A; Mitochondrial glycine transporter that imports glycine into the mitochondrial matrix. Plays an important role in providing glycine for the first enzymatic step in heme biosynthesis, the condensation of glycine with succinyl-CoA to produce 5-aminolevulinate (ALA) in the mitochondrial matrix. Required during erythropoiesis. Belongs to the mitochondrial carrier (TC 2.A.29) family. SLC25A38 subfamily.
      
 0.807
scpp8
Secretory calcium-binding phosphoprotein 8.
      
 0.807
il4r.2
Interleukin 4 receptor, tandem duplicate 1.
      
 0.806
f7i
Coagulation factor VIIi.
      
 0.803
slc16a9a
Solute carrier family 16 member 9a.
   
  
 0.752
dpys
Dihydropyrimidinase.
      
 0.669
ompa
Olfactory marker protein a.
   
  
 0.648
esm1
Endothelial cell-specific molecule 1.
   
  
 0.569
il4r.1
Interleukin 4 receptor, tandem duplicate 1.
      
 0.540
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.