Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
abhd12 | abhd13 | ENSDARP00000095479 | ENSDARP00000076697 | Lysophosphatidylserine lipase ABHD12; Lysophosphatidylserine (LPS) lipase that mediates the hydrolysis of lysophosphatidylserine, a class of signaling lipids that regulates immunological and neurological processes (By similarity). Represents a major lysophosphatidylserine lipase in the brain, thereby playing a key role in the central nervous system (By similarity). Also able to hydrolyze oxidized phosphatidylserine; oxidized phosphatidylserine is produced in response to severe inflammatory stress and constitutes a proapoptotic 'eat me' signal. Also has monoacylglycerol (MAG) lipase act [...] | Protein ABHD13. | 0.466 |
abhd13 | abhd12 | ENSDARP00000076697 | ENSDARP00000095479 | Protein ABHD13. | Lysophosphatidylserine lipase ABHD12; Lysophosphatidylserine (LPS) lipase that mediates the hydrolysis of lysophosphatidylserine, a class of signaling lipids that regulates immunological and neurological processes (By similarity). Represents a major lysophosphatidylserine lipase in the brain, thereby playing a key role in the central nervous system (By similarity). Also able to hydrolyze oxidized phosphatidylserine; oxidized phosphatidylserine is produced in response to severe inflammatory stress and constitutes a proapoptotic 'eat me' signal. Also has monoacylglycerol (MAG) lipase act [...] | 0.466 |
abhd13 | hibch | ENSDARP00000076697 | ENSDARP00000118435 | Protein ABHD13. | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA (By similarity); Belongs to the enoyl-CoA hydratase/isomerase family. | 0.475 |
abhd13 | igbp1 | ENSDARP00000076697 | ENSDARP00000015262 | Protein ABHD13. | Immunoglobulin (CD79A)-binding protein 1. | 0.880 |
abhd13 | lig4 | ENSDARP00000076697 | ENSDARP00000080083 | Protein ABHD13. | DNA ligase. | 0.592 |
abhd13 | lyplal1 | ENSDARP00000076697 | ENSDARP00000129811 | Protein ABHD13. | Lysophospholipase-like 1. | 0.483 |
abhd13 | polr2a | ENSDARP00000076697 | ENSDARP00000135038 | Protein ABHD13. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.567 |
abhd13 | tnfsf12 | ENSDARP00000076697 | ENSDARP00000091671 | Protein ABHD13. | Tumor necrosis factor superfamily member 12; Belongs to the tumor necrosis factor family. | 0.634 |
abhd13 | tnfsf13 | ENSDARP00000076697 | ENSDARP00000108128 | Protein ABHD13. | TNF superfamily member 13; Belongs to the tumor necrosis factor family. | 0.834 |
abhd13 | zdhhc15b | ENSDARP00000076697 | ENSDARP00000097436 | Protein ABHD13. | Palmitoyltransferase ZDHHC15B; Catalyzes palmitoylation of Cys residues on target proteins. | 0.463 |
abhd13 | zdhhc2 | ENSDARP00000076697 | ENSDARP00000019867 | Protein ABHD13. | Palmitoyltransferase; Belongs to the DHHC palmitoyltransferase family. | 0.484 |
hibch | abhd13 | ENSDARP00000118435 | ENSDARP00000076697 | 3-hydroxyisobutyryl-CoA hydrolase, mitochondrial; Hydrolyzes 3-hydroxyisobutyryl-CoA (HIBYL-CoA), a saline catabolite. Has high activity toward isobutyryl-CoA. Could be an isobutyryl-CoA dehydrogenase that functions in valine catabolism. Also hydrolyzes 3-hydroxypropanoyl-CoA (By similarity); Belongs to the enoyl-CoA hydratase/isomerase family. | Protein ABHD13. | 0.475 |
igbp1 | abhd13 | ENSDARP00000015262 | ENSDARP00000076697 | Immunoglobulin (CD79A)-binding protein 1. | Protein ABHD13. | 0.880 |
igbp1 | tnfsf13 | ENSDARP00000015262 | ENSDARP00000108128 | Immunoglobulin (CD79A)-binding protein 1. | TNF superfamily member 13; Belongs to the tumor necrosis factor family. | 0.645 |
lig4 | abhd13 | ENSDARP00000080083 | ENSDARP00000076697 | DNA ligase. | Protein ABHD13. | 0.592 |
lig4 | polr2a | ENSDARP00000080083 | ENSDARP00000135038 | DNA ligase. | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.438 |
lyplal1 | abhd13 | ENSDARP00000129811 | ENSDARP00000076697 | Lysophospholipase-like 1. | Protein ABHD13. | 0.483 |
polr2a | abhd13 | ENSDARP00000135038 | ENSDARP00000076697 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Protein ABHD13. | 0.567 |
polr2a | lig4 | ENSDARP00000135038 | ENSDARP00000080083 | DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA ligase. | 0.438 |
tnfsf12 | abhd13 | ENSDARP00000091671 | ENSDARP00000076697 | Tumor necrosis factor superfamily member 12; Belongs to the tumor necrosis factor family. | Protein ABHD13. | 0.634 |
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