STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ralyRALY heterogeneous nuclear ribonucleoprotein. (273 aa)    
Predicted Functional Partners:
def8
Differentially-expressed in FDCP 8 homolog.
      
 0.830
kbtbd3
Kelch repeat and BTB (POZ) domain-containing 3.
      
 0.806
u2af2b
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
   
 
 0.707
rbm28
RNA-binding motif protein 28.
   
 
 0.706
lrfn1
Leucine-rich repeat and fibronectin type III domain-containing protein 1; Involved in the regulation of excitatory synapses.
   
 
 0.681
znf804b
Zinc finger protein 804B.
    
 
 0.676
uqcrb
Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family.
   
  
 0.645
pcbp4
Poly(rC)-binding protein 4.
   
 
 0.644
sf3b4
Splicing factor 3b, subunit 4.
    
 
 0.618
eif2s2
Eukaryotic translation initiation factor 2, subunit 2 beta.
   
  
 0.609
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.