STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
grm2aGlutamate receptor, metabotropic 2a. (894 aa)    
Predicted Functional Partners:
slitrk5a
SLIT and NTRK-like family, member 5a.
   
  
 0.839
tac3b
Tachykinin precursor 3b.
      
 0.697
syt5b
Synaptotagmin Vb.
   
  
 0.672
grm8a
Glutamate receptor, metabotropic 8a.
  
0.592
neurod6a
Neurogenic differentiation factor 6-A; Differentiation factor required for neurogenesis. Acts as an upstream activator of isl1.
   
  
 0.584
grm6a
Glutamate receptor, metabotropic 6a.
  
0.584
grm4
Glutamate receptor, metabotropic 4.
  
0.582
GRM7
Glutamate metabotropic receptor 7.
  
0.582
gabbr1b
Gamma-aminobutyric acid (GABA) B receptor, 1b.
   
0.575
gabbr2
Gamma-aminobutyric acid (GABA) B receptor, 2.
   
0.574
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.