STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
meltfSerotransferrin; Transferrins are iron binding transport proteins which bind Fe(3+) ion in association with the binding of an anion, usually bicarbonate. (723 aa)    
Predicted Functional Partners:
CS067_DANRE
UPF0575 protein C19orf67 homolog; Belongs to the UPF0575 family.
      
 0.743
tnni1d
Troponin I, skeletal, slow d.
   
  
 0.634
tnni4a
Troponin I4a.
   
  
 0.621
tnni1b
Troponin I type 1b (skeletal, slow).
      
 0.591
hpxa
Hemopexin; Binds heme and transports it to the liver for breakdown and iron recovery, after which the free hemopexin returns to the circulation.
   
 
 0.585
tnni4b.1
Troponin I4b, tandem duplicate 1.
   
  
 0.584
ces2b-2
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
 
    
 0.583
F1QHP3_DANRE
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
    
 
 0.569
ENSDARP00000141227
Carboxylic ester hydrolase; Belongs to the type-B carboxylesterase/lipase family.
      
 0.569
tnni1c
Troponin I, skeletal, slow c.
   
  
 0.559
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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