STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ahnakAHNAK nucleoprotein. (6417 aa)    
Predicted Functional Partners:
s100a10a
Protein S100; Belongs to the S-100 family.
   
 0.979
s100a10b
Protein S100; Belongs to the S-100 family.
   
 0.967
anxa2a
Annexin.
   
 0.951
anxa2b
Annexin.
   
 0.949
LOC795051
PDZ domain-containing protein.
     
0.927
zgc:101785
Annexin.
   
 0.925
F1QQL4_DANRE
Si:ch211-125o16.4.
  
 
 
0.909
rhbdd1
Rhomboid domain-containing 1.
    
 
 0.863
dysf
Dysferlin, limb girdle muscular dystrophy 2B (autosomal recessive).
   
  
 0.791
zgc:112265
Zgc:112265.
    
 
 0.712
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.