STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
adnpaActivity-dependent neuroprotector homeobox a. (969 aa)    
Predicted Functional Partners:
fubp3
Far upstream element (FUSE)-binding protein 3.
   
  
 0.677
fubp1
Far upstream element (FUSE)-binding protein 1.
   
  
 0.576
bptf
Bromodomain PHD finger transcription factor.
   
  
 0.532
meis3
Myeloid ecotropic viral integration site 3.
      
 0.480
zic4
Zinc finger of the cerebellum 4.
    
 
 0.455
wfikkn2a
Info WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain-containing 2a.
      
 0.452
tspan3a
Tetraspanin.
   
  
 0.452
tspan3b
Tetraspanin.
      
 0.451
setd2
SET domain-containing 2, histone lysine methyltransferase.
   
    0.435
mphosph8
M-phase phosphoprotein 8.
   
 
 0.433
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.