STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sytl5Synaptotagmin-like 5. (670 aa)    
Predicted Functional Partners:
Kndc1
Uncharacterized protein.
      
 0.731
tmem104
Transmembrane protein 104.
      
 0.725
fam98b
Family with sequence similarity 98 member B.
      
 0.706
rab3ab
RAB3A, member RAS oncogene family, b.
   
 
 0.691
rab3aa
RAB3A, member RAS oncogene family, a.
   
 
 0.689
tmem255a
Transmembrane protein 255A.
      
 0.646
anapc2
Anaphase-promoting complex subunit 2; Belongs to the cullin family.
      
 0.627
stxbp2
Syntaxin-binding protein 2; Belongs to the STXBP/unc-18/SEC1 family.
    
 
 0.610
coro6
Coronin; Belongs to the WD repeat coronin family.
      
 0.603
myo18ab
Myosin XVIIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.544
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.