STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
zeb2bZinc finger E-box-binding homeobox 2b. (1219 aa)    
Predicted Functional Partners:
lmo7b
LIM domain 7b.
      
 0.730
churc1
Protein Churchill; Transcriptional activator that mediates FGF signaling during neural development. Plays a role in the regulation of cell movement. Does not bind DNA by itself (By similarity).
      
 0.656
col28a1b
Collagen, type XXVIII, alpha 1b.
      
 0.647
Edn3
END domain-containing protein.
      
 0.647
edn3b
Endothelin 3b.
      
 0.645
phox2bb
Paired-like homeobox 2Bb.
      
 0.567
matk
Tyrosine-protein kinase.
   
  
 0.565
ece1
Endothelin-converting enzyme 1.
      
 0.551
sntb1
Syntrophin, basic 1.
      
 0.540
ptprz1b
Protein tyrosine phosphatase receptor type Z1b.
    
 
 0.484
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.