STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pllpNovel protein similar to vertebrate transmembrane 4 superfamily member 11 (Plasmolipin) (TM4SF11). (173 aa)    
Predicted Functional Partners:
negaly6
Neuromast-expressed gpi-anchored lymphocyte antigen 6.
   
  
 0.870
camkk1b
Calcium/calmodulin-dependent protein kinase kinase 1, alpha b; Belongs to the protein kinase superfamily.
      
 0.774
malb
Mal, T cell differentiation protein b.
   
  
 0.695
lamp2
Lysosomal-associated membrane protein 2.
      
 0.554
MYADM
Si:dkeyp-67a8.2.
      
 0.550
cldnb
Cldnb protein.
      
 0.549
myadml2
Myeloid-associated differentiation marker-like 2.
      
 0.544
myo10l1
Myosin X,-like 1; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.541
clint1a
Clathrin interactor 1a.
      
 0.540
plp1a
Proteolipid protein 1a.
   
 
 0.529
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.