STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nt5dc35'-nucleotidase domain-containing 3. (576 aa)    
Predicted Functional Partners:
nuak1b
NUAK family, SNF1-like kinase, 1b.
      
 0.836
purab
Purine-rich element-binding protein Ab.
      
 0.836
samm50
Sorting and assembly machinery component 50 homolog A; May play a role in the maintenance of the structure of mitochondrial cristae; Belongs to the SAM50/omp85 family.
      
 0.761
ncoa5
Nuclear receptor coactivator 5.
      
 0.745
emc1
ER membrane protein complex subunit 1.
      
 0.731
api5
Apoptosis inhibitor 5.
      
 0.683
pik3c2a
Phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha; Belongs to the PI3/PI4-kinase family.
      
 0.667
eif4h
Eukaryotic translation initiation factor 4h.
      
 0.665
hmgb2b
High mobility group box 2b.
      
 0.620
nfybb
Nuclear transcription factor Y, beta b.
      
 0.607
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.