STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nrmNurim. (275 aa)    
Predicted Functional Partners:
emd
Emerin (Emery-Dreifuss muscular dystrophy).
   
  
 0.743
lbr
Lamin B receptor.
      
 0.607
A3KPX0_DANRE
Si:ch211-215a10.4.
      
 0.557
lmnb2
Lamin B2; Belongs to the intermediate filament family.
   
  
 0.480
gnl1
Guanine nucleotide-binding protein-like 1.
      
 0.472
dhx16
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
      
 0.471
gtf2h4
General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family.
   
  
 0.470
sun1
Sad1 and UNC84 domain-containing 1.
    
 
 0.466
tcf19l
Transcription factor 19 (SC1),-like.
   
  
 0.459
lmnl3
Lamin L3; Belongs to the intermediate filament family.
      
 0.448
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.