STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nmrk2Nicotinamide riboside kinase 2. (198 aa)    
Predicted Functional Partners:
dglucy
D-glutamate cyclase.
    
 
 0.733
uprt
Uracil phosphoribosyltransferase homolog.
  
 0.719
METTL21C
Zgc:172067 protein.
   
  
 0.650
smox
Spermine oxidase.
      
 0.644
cox5b1
Uncharacterized protein.
      
 0.644
ampd3a
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
  
  
 0.616
ampd2b
AMP deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family.
  
  
 0.579
arrdc2
Arrestin domain-containing 2.
      
 0.568
cox5b2
Cytochrome c oxidase subunit 5B2.
   
  
 0.567
ablim2
Actin-binding LIM protein family, member 2.
   
  
 0.565
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.