STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cfap299Cilia- and flagella-associated protein 299; May be involved in spermatogenesis. (239 aa)    
Predicted Functional Partners:
C14H4orf47
UPF0602 protein C4orf47 homolog.
   
  
 0.654
ccdc170
Coiled-coil domain-containing 170.
   
  
 0.571
tmem33
Transmembrane protein 33.
      
 0.564
slc30a9
Zinc transporter 9; May act as a zinc transporter involved in intracellular zinc homeostasis. May play a role as nuclear receptor coactivator. Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.
      
 0.557
ccdc113
Coiled-coil domain-containing protein 113; May be involved in primary cilium formation.
   
  
 0.524
enkur
Enkurin, TRPC channel-interacting protein.
   
  
 0.500
shisa3
Shisa family member 3.
      
 0.479
pih1d3
PIH1 domain-containing 3.
   
    0.476
acoxl
Acyl-CoA oxidase-like.
      
 0.476
ttc29
Tetratricopeptide repeat domain 29.
   
    0.470
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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