STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
psmb11bProteasome 20S subunit beta 11b. (362 aa)    
Predicted Functional Partners:
psmb4
Proteasome subunit beta; Belongs to the peptidase T1B family.
   
 0.971
psmb2
Proteasome subunit beta.
   
 0.968
psma3
Proteasome subunit alpha type.
   
 0.967
psmb1
Proteasome subunit beta.
   
 0.960
psmb3
Proteasome subunit beta.
   
 0.960
psma5
Proteasome subunit alpha type.
   
 0.954
psma1
Proteasome subunit alpha type.
   
 0.952
psma8
Proteasome subunit alpha type.
   
 0.951
psma4
Proteasome subunit alpha type.
   
 0.947
psmb9a
Proteasome subunit beta.
  
0.937
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.