STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
spaca9Sperm acrosome-associated 9. (220 aa)    
Predicted Functional Partners:
CFAP77
Cilia- and flagella-associated protein 77.
   
 
 0.703
C19H5orf49
Si:dkeyp-46h3.1.
    
 
 0.681
efhc1
EF-hand domain (C-terminal)-containing 1.
   
   0.662
fam183a
Family with sequence similarity 183 member A.
   
 
 0.646
CA194_DANRE
Uncharacterized protein C1orf194 homolog; May play an important role for the maintenance of myelin-axon integrity (By similarity). May affect intracellular Ca(2+) homeostasis (By similarity).
   
   0.640
cfap45
Cilia and flagella-associated protein 45.
   
   0.640
ccdc173
Coiled-coil domain-containing 173.
    
 
 0.632
cfap126
Protein Flattop; Acts as a regulator of cilium basal body docking and positioning in mono- and multiciliated cells. Belongs to the Flattop family.
   
   0.626
enkur
Enkurin, TRPC channel-interacting protein.
   
   0.624
ankrd29
Ankyrin repeat domain-containing protein 29.
    
 
 0.614
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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