STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
slc39a6Solute carrier family 39 member 6. (742 aa)    
Predicted Functional Partners:
slc39a9
Zinc transporter ZIP9; May act as a zinc-influx transporter; Belongs to the ZIP transporter (TC 2.A.5) family.
   
 
 0.912
slc39a1
Zinc transporter ZIP1; Mediates zinc uptake.
   
 
 0.909
slc30a6
Zinc transporter 6; Zinc-efflux transporter which allocates the cytoplasmic zinc to the trans-Golgi network (TGN) as well as the vesicular compartment.
  
 
 0.894
slc30a1a
Solute carrier family 30 (Zinc transporter), member 1.
  
 
 0.891
slc30a1b
Solute carrier family 30 member 1b.
  
 
 0.891
slc30a4
Solute carrier family 30 (Zinc transporter), member 4.
   
 
 0.875
slc30a5
Zinc transporter 5; Functions as a zinc transporter. Partly regulates cellular zinc homeostasis (By similarity).
  
 
 0.875
slc30a2
Solute carrier family 30 member 2.
    
 
 0.871
prnpa
Prion protein a.
      
 0.860
slc30a9
Zinc transporter 9; May act as a zinc transporter involved in intracellular zinc homeostasis. May play a role as nuclear receptor coactivator. Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. SLC30A subfamily.
     
 0.802
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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