STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ehmt1aEuchromatic histone-lysine N-methyltransferase 1a. (1059 aa)    
Predicted Functional Partners:
camkmt
Calmodulin-lysine N-methyltransferase.
     
 0.788
cdyl
Chromodomain protein, Y-like.
   
 
 0.756
cbx1b
Chromobox homolog 1b (HP1 beta homolog Drosophila).
    
 
 0.702
plod2
Procollagen lysine 2-oxoglutarate 5-dioxygenase 2b isoform.
    
  0.691
plod1a
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1a.
    
  0.691
plod3
Procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3.
    
  0.691
mettl22
Methyltransferase-like 22.
      
 0.686
hdac11
Histone deacetylase 11.
  
 
 0.670
MEPCE
Si:ch1073-157b13.1.
   
 
 0.654
h1m
Linker histone H1M.
    
 
 0.650
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.