STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
golga1Golgin A1. (862 aa)    
Predicted Functional Partners:
tmf1
TATA element modulatory factor 1.
   
 
 0.831
gcc1
GRIP and coiled-coil domain-containing 1.
    
 0.815
pitpnb
Phosphatidylinositol transfer protein, beta.
   
  
 0.748
golga3
Golgin A3.
   
  
 0.669
gorasp1a
Golgi reassembly-stacking protein 1a.
   
  
 0.646
blzf1
Basic leucine zipper nuclear factor 1.
      
 0.611
arfrp1
ADP-ribosylation factor-related protein 1.
     
 0.603
daglb
Diacylglycerol lipase, beta.
      
 0.577
uso1
USO1 homolog, vesicle docking protein (Yeast).
   
 
 0.574
myo18ab
Myosin XVIIIAb; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
    
 
 0.573
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.