STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vgll4lVestigial-like 4 like. (266 aa)    
Predicted Functional Partners:
tead3b
TEA domain family member 3 b.
   
 
 0.888
tead3a
Transcriptional enhancer factor TEF-5; Transcription factor which plays a key role in the Hippo signaling pathway, a pathway involved in organ size control and tumor suppression by restricting proliferation and promoting apoptosis.
    
 
 0.848
tead1b
TEA domain family member 1b.
    
 
 0.815
abtb2a
Ankyrin repeat and BTB (POZ) domain-containing 2a.
      
 0.804
sypl2b
Novel protein containing a membrane-associating domain (Wu:fc22a07).
      
 0.695
dhrs13a.1
Dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 1; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
      
 0.695
tead1a
TEA domain family member 1a.
    
 
 0.693
rassf7b
Ras association domain family member 7b.
   
  
 0.670
mbd6
Methyl-CpG-binding domain protein 6.
      
 0.666
ndnf
Neuron-derived neurotrophic factor.
      
 0.649
Your Current Organism:
Danio rerio
NCBI taxonomy Id: 7955
Other names: Brachydanio rerio, Brachydanio rerio frankei, Cyprinus rerio, D. rerio, Danio frankei, Danio rerio frankei, leopard danio, zebra danio, zebra fish, zebrafish
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.